Library issues through Mac-Anaconda

rubcaspac60 · July 29, 2020, 1:07pm

Good day,

I am trying to install the program in another computer as before. This time, it have issues about libraries which seem to be missing from the package.
I am no sure about this, if you could please take a look at the errors I get when running the test.

'Traceback (most recent call last):
File “/Users/xxx/opt/anaconda3/envs/p4env/bin/psi4”, line 177, in
import psi4
File “/Users/xxx/opt/anaconda3/envs/p4env/lib//python3.6/site-packages/psi4/init.py”, line 82, in
from .driver import endorsed_plugins
File “/Users/xxx/opt/anaconda3/envs/p4env/lib//python3.6/site-packages/psi4/driver/endorsed_plugins.py”, line 33, in
import v2rdm_casscf
File “/Users/xxx/opt/anaconda3/envs/p4env/lib//python3.6/site-packages/v2rdm_casscf/init.py”, line 45, in
psi4.core.plugin_load(sofile)
RuntimeError:
Fatal Error: load_plugin: Cannot open library: dlopen(/Users/xxx/opt/anaconda3/envs/p4env/lib/python3.6/site-packages/v2rdm_casscf/v2rdm_casscf.so, 1): Library not loaded: @rpath/core.so
Referenced from: /Users/xxx/opt/anaconda3/envs/p4env/lib/python3.6/site-packages/v2rdm_casscf/v2rdm_casscf.so
Reason: image not found
Error occurred in file: /Users/github/builds/conda-builds/psi4-multiout_1557977521159/work/psi4/src/psi4/libplugin/load_plugin.cc on line: 52
’

Any help would be highly appreciated.

Thank you

jmisiewicz · July 29, 2020, 1:32pm

We have “best practices” for help topics. Please read them.

In particular, we need to know exactly what conda command you ran, as I said on your previous topic.

rubcaspac60 · July 29, 2020, 3:36pm

My apologies.

We manage to install the binary using the conda commands, but whenever we test or try a job it brings the error.

Here is the output of the requested commands.

Last login: Wed Jul 29 17:40:01 on ttys001
(base) xxx@xxx ~ % conda activate p4env
(p4env) xxx@xxx ~ % psi4 --version
Traceback (most recent call last):
File “/Users/xxx/opt/anaconda3/envs/p4env/bin/psi4”, line 177, in
import psi4
File “/Users/xxx/opt/anaconda3/envs/p4env/lib//python3.6/site-packages/psi4/init.py”, line 82, in
from .driver import endorsed_plugins
File “/Users/xxx/opt/anaconda3/envs/p4env/lib//python3.6/site-packages/psi4/driver/endorsed_plugins.py”, line 33, in
import v2rdm_casscf
File “/Users/xxx/opt/anaconda3/envs/p4env/lib//python3.6/site-packages/v2rdm_casscf/init.py”, line 45, in
psi4.core.plugin_load(sofile)
RuntimeError:
Fatal Error: load_plugin: Cannot open library: dlopen(/Users/xxx/opt/anaconda3/envs/p4env/lib/python3.6/site-packages/v2rdm_casscf/v2rdm_casscf.so, 1): Library not loaded: @rpath/core.so
Referenced from: /Users/xxx/opt/anaconda3/envs/p4env/lib/python3.6/site-packages/v2rdm_casscf/v2rdm_casscf.so
Reason: image not found
Error occurred in file: /Users/github/builds/conda-builds/psi4-multiout_1557977521159/work/psi4/src/psi4/libplugin/load_plugin.cc on line: 52
The most recent 5 function calls were:

(p4env) xxx@xxx ~ % conda list

packages in environment at /Users/xxx/opt/anaconda3/envs/p4env:

(p4env) xxx@xxx ~ % which conda python psi4
conda () {
if [ “$#” -lt 1 ]
then
“$CONDA_EXE” $_CE_M $_CE_CONDA
else
\local cmd="$1"
shift
case “$cmd” in
(activate | deactivate) __conda_activate “$cmd” “$@” ;;
(install | update | upgrade | remove | uninstall) CONDA_INTERNAL_OLDPATH="${PATH}"
__add_sys_prefix_to_path
“$CONDA_EXE” $_CE_M $_CE_CONDA “$cmd” “$@”
\local t1=$?
PATH="${CONDA_INTERNAL_OLDPATH}"
if [ $t1 = 0 ]
then
__conda_reactivate
else
return $t1
fi ;;
(*) CONDA_INTERNAL_OLDPATH="${PATH}"
__add_sys_prefix_to_path
“$CONDA_EXE” $_CE_M $_CE_CONDA “$cmd” “$@”
\local t1=$?
PATH="${CONDA_INTERNAL_OLDPATH}"
return $t1 ;;
esac
fi
}
/Users/xxx/opt/anaconda3/envs/p4env/bin/python
/Users/xxx/opt/anaconda3/envs/p4env/bin/psi4
(p4env) xxx@xxx ~ %

Any information and help will be greatly appreciated.
I thank you for your time.
Cheers

Library issues through Mac-Anaconda

packages in environment at /Users/xxx/opt/anaconda3/envs/p4env:

Name Version Build Channel