----------------------------------------------------------------------- Psi4: An Open-Source Ab Initio Electronic Structure Package Psi4 1.7 release Git: Rev {HEAD} 6ce35a5 D. G. A. Smith, L. A. Burns, A. C. Simmonett, R. M. Parrish, M. C. Schieber, R. Galvelis, P. Kraus, H. Kruse, R. Di Remigio, A. Alenaizan, A. M. James, S. Lehtola, J. P. Misiewicz, M. Scheurer, R. A. Shaw, J. B. Schriber, Y. Xie, Z. L. Glick, D. A. Sirianni, J. S. O'Brien, J. M. Waldrop, A. Kumar, E. G. Hohenstein, B. P. Pritchard, B. R. Brooks, H. F. Schaefer III, A. Yu. Sokolov, K. Patkowski, A. E. DePrince III, U. Bozkaya, R. A. King, F. A. Evangelista, J. M. Turney, T. D. Crawford, C. D. Sherrill, J. Chem. Phys. 152(18) 184108 (2020). https://doi.org/10.1063/5.0006002 Additional Code Authors E. T. Seidl, C. L. Janssen, E. F. Valeev, M. L. Leininger, J. F. Gonthier, R. M. Richard, H. R. McAlexander, M. Saitow, X. Wang, P. Verma, M. H. Lechner, A. Jiang, S. Behnle, A. G. Heide, M. F. Herbst, and D. L. Poole Previous Authors, Complete List of Code Contributors, and Citations for Specific Modules https://github.com/psi4/psi4/blob/master/codemeta.json https://github.com/psi4/psi4/graphs/contributors http://psicode.org/psi4manual/master/introduction.html#citing-psifour ----------------------------------------------------------------------- Psi4 started on: Monday, 04 September 2023 05:29PM Process ID: 2452257 Host: cn77.barbora.it4i.cz PSIDATADIR: /home/mmithun/miniconda3/share/psi4 Memory: 500.0 MiB Threads: 12 ==> Input File <== -------------------------------------------------------------------------- memory 8GB molecule { 0 1 C 2.81659140 4.07106017 0.00169116 N 3.28738938 5.28582510 0.00295723 C 1.32406621 4.04052425 0.00188718 C 2.13348946 6.18502579 0.00410675 H -0.13483008 5.65751235 0.00485604 O 2.20433473 7.39303013 0.00452261 H 3.51352867 3.22508753 0.00135084 C 0.89353785 5.31168166 0.00400857 H 0.72158016 3.13726570 0.00076427 -- 0 1 C 6.05784731 1.27250692 0.00091122 O 5.47520679 0.20156235 -0.00190551 C 7.58401303 1.47534488 0.00023312 N 5.45229993 2.55461044 0.00433430 C 6.44262407 3.44257228 0.00449751 H 7.01214712 5.42383807 0.00149968 C 7.78827053 2.79976379 0.00294798 N 6.23608229 4.77645579 0.00524026 H 5.26963489 5.12165239 0.00396280 H 8.34759922 0.70328872 -0.00225959 H 8.73571981 3.33226338 0.00396328 units angstrom no_reorient symmetry c1 } set { basis CC-pVDZ scf_type df opt_type min maxiter 500 geom_maxiter 500 g_convergence QCHEM print_trajectory_xyz_file true opt_coordinates cartesian step_type nr } optimize('b3lyp-d3', bsse_type='cp') -------------------------------------------------------------------------- Memory set to 7.451 GiB by Python driver. Scratch directory: /scratch/project/open-27-55/mithun/tmp/s.8/ //>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>>// // ManyBody Setup: N-Body Levels [1, 2]// //<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<<< exec(content) File "", line 58, in File "/home/mmithun/miniconda3/lib//python3.10/site-packages/psi4/driver/driver.py", line 1245, in optimize G, wfn = gradient(lowername, return_wfn=True, molecule=molecule, **kwargs) File "/home/mmithun/miniconda3/lib//python3.10/site-packages/psi4/driver/driver.py", line 613, in gradient plan.compute() File "/home/mmithun/miniconda3/lib//python3.10/site-packages/psi4/driver/driver_nbody.py", line 1018, in compute t.compute(client=client) File "/home/mmithun/miniconda3/lib//python3.10/site-packages/psi4/driver/task_base.py", line 199, in compute self.result = qcng.compute( File "/home/mmithun/miniconda3/lib//python3.10/site-packages/qcengine/compute.py", line 105, in compute output_data = executor.compute(input_data, config) File "/home/mmithun/miniconda3/lib//python3.10/site-packages/qcengine/programs/psi4.py", line 121, in compute pversion = parse_version(self.get_version()) File "/home/mmithun/miniconda3/lib//python3.10/site-packages/qcengine/programs/psi4.py", line 90, in get_version exc["proc"].wait(timeout=30) File "/home/mmithun/miniconda3/lib/python3.10/subprocess.py", line 1209, in wait return self._wait(timeout=timeout) File "/home/mmithun/miniconda3/lib/python3.10/subprocess.py", line 1935, in _wait raise TimeoutExpired(self.args, timeout) subprocess.TimeoutExpired: Command '['/home/mmithun/miniconda3/bin/psi4', '--version']' timed out after 30 seconds Printing out the relevant lines from the Psithon --> Python processed input file: core.set_global_option("GEOM_MAXITER", 500) core.set_global_option("G_CONVERGENCE", "QCHEM") core.set_global_option("PRINT_TRAJECTORY_XYZ_FILE", "true") core.set_global_option("OPT_COORDINATES", "cartesian") core.set_global_option("STEP_TYPE", "nr") --> optimize('b3lyp-d3', bsse_type='cp') !----------------------------------------------------------------------------------! ! ! ! Command '['/home/mmithun/miniconda3/bin/psi4', '--version']' timed out after 30 ! ! seconds ! ! ! !----------------------------------------------------------------------------------! Psi4 stopped on: Monday, 04 September 2023 05:30PM Psi4 wall time for execution: 0:00:47.23 *** Psi4 encountered an error. Buy a developer more coffee! *** Resources and help at github.com/psi4/psi4.